Expression Analysis
   Expression Profile
   Differential Expression
   Correlation of Expression
Methylation Analysis
   Methylation Profile
   Differential Methylation
Clinical Analysis
   Survival Plot
   Clinical Profile
   Differential Clinical Parameter
Oncovirus Analysis 
   Expression Profile
   Methylation Profile
   Differential Expression
   Differential Methylation
   Survival Plot
   -Gene Associated Analysis
   -Virus Associated Analysis
   Clinical Profile
   Differential Clinical Parameter
   Virus Profile
Data Download
Tutorial
Contact


Virus Associated Differential Methylation
Virus:
Cancer selection:
Gene region:
Threshold
FDR Adjusted p-value <    |Δβ| >  
     

User Guide:

Getting the list of genes whose methylation levels are most differential between viral and non-viral cancer samples.
(Methylation data is measured by Infinium HumanMethylation450K BeadChip)

  • Virus Types: Select virus of your interest.
  • Cancer selection: Select cancer type of interest from the drop-down menu.
  • Gene region: Select the region of gene that you are interested (Promoter, GeneBody, Promoter+GeneBody).
  • Threshold: Set the threshold values of either or both parameters with which to filter the list of genes.
  • p-value: Set custom p-value. Return genes with a p-value equal to or lower than threshold.
  • |Δβ|: Set custom beta difference value (beta value shows methylation level).